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Universal DNA methylation age across mammalian tissues

Ake T. Lu, Zhe Fei, Amin Haghani, Todd R. Robeck, Joseph A. Zoller, Caesar Z. Li, Robert Lowe, Qi Yan, Joshua Zhang, Hoang‐Giang Vu, Julia Ablaeva, Victoria A. Acosta-Rodríguez, Danielle M. Adams, Javier Almunia, Ajoy Aloysius

Nature Aging · 2023 · ▲ 401 citations

Abstract

Aging, often considered a result of random cellular damage, can be accurately estimated using DNA methylation profiles, the foundation of pan-tissue epigenetic clocks. Here, we demonstrate the development of universal pan-mammalian clocks, using 11,754 methylation arrays from our Mammalian Methylation Consortium, which encompass 59 tissue types across 185 mammalian species. These predictive models estimate mammalian tissue age with high accuracy (r > 0.96). Age deviations correlate with human mortality risk, mouse somatotropic axis mutations and caloric restriction(definition). We identified specific cytosines with methylation levels that change with age across numerous species. These sites, highly enriched in polycomb repressive complex 2-binding locations, are near genes implicated in mammalian development, cancer, obesity and longevity. Our findings offer new evidence suggesting that aging is evolutionarily conserved and intertwined with developmental processes across all mammals.

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Provenance

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OpenAlex
DOI
10.1038/s43587-023-00462-6
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2026-07-28 MST

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APA
Lu, A.T., Fei, Z., Haghani, A., Robeck, T.R., Zoller, J.A., Li, C.Z., Lowe, R., Yan, Q., Zhang, J., Vu, H., Ablaeva, J., Acosta-Rodríguez, V.A., Adams, D.M., Almunia, J., Aloysius, A., Ardehali, R., Arneson, A., Baker, C.S., Banks, G., &amp; Belov, K. (2023). Universal DNA methylation age across mammalian tissues. <em>Nature Aging</em>. https://doi.org/10.1038/s43587-023-00462-6
Vancouver
Lu AT, Fei Z, Haghani A, Robeck TR, Zoller JA, Li CZ, et al. Universal DNA methylation age across mammalian tissues. Nature Aging. 2023. doi:10.1038/s43587-023-00462-6.
BibTeX
@article{ake2023Univer, title = {Universal DNA methylation age across mammalian tissues}, author = {Ake T. Lu and Zhe Fei and Amin Haghani and Todd R. Robeck and Joseph A. Zoller and Caesar Z. Li and Robert Lowe and Qi Yan and Joshua Zhang and Hoang‐Giang Vu and Julia Ablaeva and Victoria A. Acosta-Rodríguez and Danielle M. Adams and Javier Almunia and Ajoy Aloysius and Reza Ardehali and A Arneson and C. Scott Baker and Gareth Banks and Katherine Belov and Nigel C. Bennett and Peter C. Black and Daniel T. Blumstein and Eleanor K. Bors and Charles E. Breeze}, journal = {Nature Aging}, year = {2023}, doi = {10.1038/s43587-023-00462-6}, }

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