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Intelligent high‐throughput intervention testing platform in <i>Daphnia</i>

Yongmin Cho, Rachael A Jonas-Closs, Lev Y. Yampolsky, Marc W. Kirschner, Leonid Peshkin

Aging Cell · 2022 · ▲ 23 citations

Abstract

We present a novel platform for testing the effects of interventions on the life- and healthspan(definition) of a short-lived freshwater organism with complex behavior and physiology-the planktonic crustacean Daphnia magna. Within this platform, dozens of complex behavioral features of both routine motion and response to stimuli are continuously quantified over large synchronized cohorts via an automated phenotyping pipeline. We build predictive machine-learning models calibrated using chronological age and extrapolate onto phenotypic age. We further apply the model to estimate the phenotypic age under pharmacological perturbation. Our platform provides a scalable framework for drug screening and characterization in both life-long and instant assays as illustrated using a long-term dose-response profile of metformin and a short-term assay of well-studied substances such as caffeine and alcohol.

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Provenance

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OpenAlex
DOI
10.1111/acel.13571
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2026-06-14 MST

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APA
Cho, Y., Jonas-Closs, R.A., Yampolsky, L.Y., Kirschner, M.W., &amp; Peshkin, L. (2022). Intelligent high‐throughput intervention testing platform in <i>Daphnia</i>. <em>Aging Cell</em>. https://doi.org/10.1111/acel.13571
Vancouver
Cho Y, Jonas-Closs RA, Yampolsky LY, Kirschner MW, Peshkin L. Intelligent high‐throughput intervention testing platform in <i>Daphnia</i>. Aging Cell. 2022. doi:10.1111/acel.13571.
BibTeX
@article{yongmin2022Intell, title = {Intelligent high‐throughput intervention testing platform in <i>Daphnia</i>}, author = {Yongmin Cho and Rachael A Jonas-Closs and Lev Y. Yampolsky and Marc W. Kirschner and Leonid Peshkin}, journal = {Aging Cell}, year = {2022}, doi = {10.1111/acel.13571}, }

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