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Aging- and alcohol-associated spatial transcriptomic signature in mouse acute pancreatitis reveals heterogeneity of inflammation and potential pathogenic factors
Rachel R. Tindall, Yuntao Yang, Isabella E Hernandez, Amy Qin, Jiajing Li, Yinjie Zhang, Thomas H. Gomez, Mamoun Younes, Qiang Shen, Jennifer M. Bailey, Zhongming Zhao, Daniel C. Kraushaar, Patricia Castro, Yanna Cao, W. Jim Zheng
Journal of Molecular Medicine · 2024 · ▲ 5 citations
Abstract
The rapidly aging population is consuming more alcohol, leading to increased alcohol-associated acute pancreatitis (AAP) with high mortality. However, the mechanisms remain undefined, and currently there are no effective therapies available. This study aims to elucidate aging- and alcohol-associated spatial transcriptomic signature by establishing an aging AAP mouse model and applying Visium spatial transcriptomics for understanding of the mechanisms in the context of the pancreatic tissue. Upon alcohol diet feeding and caerulein treatment, aging mice (18 months) developed significantly more severe AAP with 5.0-fold increase of injury score and 2.4-fold increase of amylase compared to young mice (3 months). Via Visium spatial transcriptomics, eight distinct tissue clusters were revealed from aggregated transcriptomes of aging and young AAP mice: five acinar, two stromal, and one islet, which were then merged into three clusters: acinar, stromal, and islet for the comparative analysis. Compared to young AAP mice, > 1300 differentially expressed genes (DEGs) and approximately 3000 differentially regulated pathways were identified in aging AAP mice. The top five DEGs upregulated in aging AAP mice include Mmp8, Ppbp, Serpina3m, Cxcl13, and Hamp with heterogeneous distributions among the clusters. Taken together, this study demonstrates spatial heterogeneity of inflammatory processes in aging AAP mice, offering novel insights into the mechanisms and potential drivers for AAP development. KEY MESSAGES: Mechanisms regarding high mortality of AAP in aging remain undefined. An aging AAP mouse model was developed recapturing clinical exhibition in humans. Spatial transcriptomics identified contrasted DEGs in aging vs. young AAP mice. Top five DEGs were Mmp8, Ppbp, Serpina3m, Cxcl13, and Hamp in aging vs. young AAP mice. Our findings shed insights for identification of molecular drivers in aging AAP.
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- 10.1007/s00109-024-02460-6
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- 2026-07-25 MST
Cite this
APA
Tindall, R.R., Yang, Y., Hernandez, I.E., Qin, A., Li, J., Zhang, Y., Gomez, T.H., Younes, M., Shen, Q., Bailey, J.M., Zhao, Z., Kraushaar, D.C., Castro, P., Cao, Y., Zheng, W.J., & Ko, T.C. (2024). Aging- and alcohol-associated spatial transcriptomic signature in mouse acute pancreatitis reveals heterogeneity of inflammation and potential pathogenic factors. <em>Journal of Molecular Medicine</em>. https://doi.org/10.1007/s00109-024-02460-6
Vancouver
Tindall RR, Yang Y, Hernandez IE, Qin A, Li J, Zhang Y, et al. Aging- and alcohol-associated spatial transcriptomic signature in mouse acute pancreatitis reveals heterogeneity of inflammation and potential pathogenic factors. Journal of Molecular Medicine. 2024. doi:10.1007/s00109-024-02460-6.
BibTeX
@article{rachel2024Aginga,
title = {Aging- and alcohol-associated spatial transcriptomic signature in mouse acute pancreatitis reveals heterogeneity of inflammation and potential pathogenic factors},
author = {Rachel R. Tindall and Yuntao Yang and Isabella E Hernandez and Amy Qin and Jiajing Li and Yinjie Zhang and Thomas H. Gomez and Mamoun Younes and Qiang Shen and Jennifer M. Bailey and Zhongming Zhao and Daniel C. Kraushaar and Patricia Castro and Yanna Cao and W. Jim Zheng and Tien C. Ko},
journal = {Journal of Molecular Medicine},
year = {2024},
doi = {10.1007/s00109-024-02460-6},
}
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