Open access · CC-BY
via OpenAlex
Machine learning-based integration develops an immune-derived lncRNA signature for improving outcomes in colorectal cancer
Zaoqu Liu, Long Liu, Siyuan Weng, Chunguang Guo, Qin Dang, Hui Xu, Libo Wang, Taoyuan Lu, Yuyuan Zhang, Zhenqiang Sun, Xinwei Han
Nature Communications · 2022 · ▲ 931 citations
Abstract
Long noncoding RNAs (lncRNAs) are recently implicated in modifying immunology in colorectal cancer (CRC). Nevertheless, the clinical significance of immune-related lncRNAs remains largely unexplored. In this study, we develope a machine learning-based integrative procedure for constructing a consensus immune-related lncRNA signature (IRLS). IRLS is an independent risk factor for overall survival and displays stable and powerful performance, but only demonstrates limited predictive value for relapse-free survival. Additionally, IRLS possesses distinctly superior accuracy than traditional clinical variables, molecular features, and 109 published signatures. Besides, the high-risk group is sensitive to fluorouracil-based adjuvant chemotherapy, while the low-risk group benefits more from bevacizumab. Notably, the low-risk group displays abundant lymphocyte infiltration, high expression of CD8A and PD-L1, and a response to pembrolizumab. Taken together, IRLS could serve as a robust and promising tool to improve clinical outcomes for individual CRC patients.
◌ CITATION ONLY
Full text is not openly licensed for redistribution here. Read it at the source:
Provenance
- Source
- OpenAlex
- DOI
- 10.1038/s41467-022-28421-6
- Canonical
- link ↗
- Fetched
- 2026-07-25 MST
Cite this
APA
Liu, Z., Liu, L., Weng, S., Guo, C., Dang, Q., Xu, H., Wang, L., Lu, T., Zhang, Y., Sun, Z., & Han, X. (2022). Machine learning-based integration develops an immune-derived lncRNA signature for improving outcomes in colorectal cancer. <em>Nature Communications</em>. https://doi.org/10.1038/s41467-022-28421-6
Vancouver
Liu Z, Liu L, Weng S, Guo C, Dang Q, Xu H, et al. Machine learning-based integration develops an immune-derived lncRNA signature for improving outcomes in colorectal cancer. Nature Communications. 2022. doi:10.1038/s41467-022-28421-6.
BibTeX
@article{zaoqu2022Machin,
title = {Machine learning-based integration develops an immune-derived lncRNA signature for improving outcomes in colorectal cancer},
author = {Zaoqu Liu and Long Liu and Siyuan Weng and Chunguang Guo and Qin Dang and Hui Xu and Libo Wang and Taoyuan Lu and Yuyuan Zhang and Zhenqiang Sun and Xinwei Han},
journal = {Nature Communications},
year = {2022},
doi = {10.1038/s41467-022-28421-6},
}
Research neighborhood
References, citing works, and semantically nearest findings. Click a node to open it.
Related findings
Frontiers in Cell and Developmental Biology 2021
Open access · CC-BY
A Prognostic Ferroptosis-Related lncRNAs Signature Associated With Immune Landscape and Radiotherapy Response in Glioma
2026
Preprint
OncoMRD BREAST for Monitoring Minimal Residual Disease in Breast Cancer: A Megadata Large-Scale Retrospective Clinical Correlation Study
npj aging 2026
Open access · OA
HCCaging: a liver physiological aging-related biomarker for hepatocellular carcinoma diagnosis based on transcriptome data.
Gastroenterology 2010
Open access · OA
Primary Prevention of Colorectal Cancer
Scientific data 2026
Citation only
A curated arterial stiffness dataset for vascular age prediction in China.
Canadian geriatrics journal : CGJ 2026
Open access · OA