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Open Genes—a new comprehensive database of human genes associated with aging and longevity
Ekaterina Rafikova, Nikolay M. Nemirovich-Danchenko, Anna Ogmen, Anna Parfenenkova, Anastasiia Velikanova, Stanislav Tikhonov, Leonid Peshkin, Konstantin Rafikov, Olga Spiridonova, Yulia Belova, Timofey S. Glinin, Anastasia Egorova, Mikhail Batin
Nucleic Acids Research · 2023 · ▲ 33 citations
Abstract
The Open Genes database was created to enhance and simplify the search for potential aging therapy targets. We collected data on 2402 genes associated with aging and developed convenient tools for searching and comparing gene features. A comprehensive description of genes has been provided, including lifespan-extending interventions, age-related changes, longevity associations, gene evolution, associations with diseases and telomere(definition) attrition, cellular senescence(definition))." style="text-decoration:underline dotted; text-underline-offset:2px; cursor:help;">hallmarks of aging(definition), and functions of gene products. For each experiment, we presented the necessary structured data for evaluating the experiment's quality and interpreting the study's findings. Our goal was to stay objective and precise while connecting a particular gene to human aging. We distinguished six types of studies and 12 criteria for adding genes to our database. Genes were classified according to the confidence level of the link between the gene and aging. All the data collected in a database are provided both by an API and a user interface. The database is publicly available on a website at https://open-genes.org/.
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- 10.1093/nar/gkad712
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- 2026-10-23 MST
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APA
Rafikova, E., Nemirovich-Danchenko, N.M., Ogmen, A., Parfenenkova, A., Velikanova, A., Tikhonov, S., Peshkin, L., Rafikov, K., Spiridonova, O., Belova, Y., Glinin, T.S., Egorova, A., & Batin, M. (2023). Open Genes—a new comprehensive database of human genes associated with aging and longevity. <em>Nucleic Acids Research</em>. https://doi.org/10.1093/nar/gkad712
Vancouver
Rafikova E, Nemirovich-Danchenko NM, Ogmen A, Parfenenkova A, Velikanova A, Tikhonov S, et al. Open Genes—a new comprehensive database of human genes associated with aging and longevity. Nucleic Acids Research. 2023. doi:10.1093/nar/gkad712.
BibTeX
@article{ekaterina2023OpenGe,
title = {Open Genes—a new comprehensive database of human genes associated with aging and longevity},
author = {Ekaterina Rafikova and Nikolay M. Nemirovich-Danchenko and Anna Ogmen and Anna Parfenenkova and Anastasiia Velikanova and Stanislav Tikhonov and Leonid Peshkin and Konstantin Rafikov and Olga Spiridonova and Yulia Belova and Timofey S. Glinin and Anastasia Egorova and Mikhail Batin},
journal = {Nucleic Acids Research},
year = {2023},
doi = {10.1093/nar/gkad712},
}
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